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FEATURE – PATHOLOGY

Mainstreaming of genomic testing increasing patient options

Dr Dimitar Azmanov

Genetic Pathologist

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There’s a lot of talk right now about mainstreaming, in which all or part of the clinical genome testing process is handled by non-genetics health professionals, and there’s some seminal international research being done on developing various models of delivery.

The concept is not new. Mainstreaming was originally coined in the context of cancer genomics testing in the last decade, when gene panels for breast cancer and other inherited cancer genes became available to ordering and to being integrated into clinical practice through oncology services, not necessarily through the standard of care of clinical genetic services.

Prior to the availability of mainstreaming of genomic testing, the standard of care for many years has been to have the clinical genetics team primarily responsible for the management of patients and families with heritable conditions. The involvement of the clinical genetics service has included the continuum from assessment, through decision on appropriate testing, pre-test genetic counselling, test ordering and result disclosure, to patient and family management based on the available genetic information. In the standard of care, genetic pathology laboratories have provided testing services for patients referred exclusively by the clinical genetics team.

However, two factors have changed this equation.

Number one: disruptive genomics technologies which have brought mainstreaming closer to the patients and their families, because they provide more opportunities to do genomic testing at scale or at large to bigger populations, to bigger numbers of people.

The other factor contributing to mainstreaming is that the genomics clinical workforce has been relatively steady over the years. So, the greater demand for genomic services requires the involvement of other health professionals who help and facilitate the integration of genomic testing into patient management.

This year, there have been a few seminal papers in the medical literature, mainly from Canada and the UK, on proposed frameworks for how mainstreaming could be truly integrated into practice. The Canadians, for instance, determined four different models depending on how much or how little each of the non-genetic clinicians gets involved in this whole process.

In the traditional model, they don’t get involved at all. The only thing the non-genetic clinicians do is refer the patient; and everything else is managed through the genetics clinic.

The mainstreaming models have non-genetic clinicians involved, either partially or entirely, in the whole process of care delivery surrounding genomic testing performed by the genetic pathology laboratories.

One model has the non-genetics clinician taking all the history, understanding what type of testing is required for the patient, and ordering the test – but then the involvement stops there. Everything else is maintained by the clinical genetic service.

Another model has the non-genetics clinician ordering the test, receiving the results, providing all the counselling, pre-test and post-test. However, if testing of other family members is required, then the patient is referred to the clinical genetic service for that follow-up.

I would say from my experience over the last decade or so that various degrees of these models have been integrated into practice here. However, it all depends on various other factors.

To start off with, it depends on the characteristics of the patient and the disease. If the disorder or the family history or context is complex, then the non-genetics clinicians are less likely to engage in mainstreaming of genetic/genomic testing.

If, for instance, a patient has a well-defined genetically determined kidney disease, a nephrologist may be comfortable with ordering the genetic test and not engaging clinical genetic services. Whereas, if the disorder is more complex or syndromic involving other systems (let’s say eye, brain, in addition to the kidney), then they may decide it’s beyond their scope and refer the patient to clinical genetic services which – by default – are well versed in complex genomic disorders.

“ The mainstreaming models have non-genetic clinicians involved, either partially or entirely, in the whole process of care delivery surrounding genomic testing performed by the genetic pathology laboratories.

If a disorder has a relatively high prevalence in the general population, the likelihood of getting into mainstreaming is higher. Take HFE-related hemochromatosis testing, as an example. It’s been around for ages, and it can be ordered by non-genetics clinicians, and the disorder has been managed well outside of the clinical genetics services.

Chromosomal testing has also been standard of care for reproductive physicians and fertility clinics, given the prevalence of  chromosomal disorders.

Chromosomal microarray also became a first-line test in the context of developmental disorders and autism. And since the Medicare Benefits Schedule (MBS) update in 2013, paediatricians have been able to order the test and manage the patients based on the information from that testing. Of course, once they have received, for example, an abnormal result, those non-genetics clinicians have been referring patients to genetics clinics for further management.

Now, this leads us to the test characteristics. If a test is really complex, let’s say the whole genome, then that complexity makes it less amenable to mainstreaming.

If the result is relatively straightforward – a binary result, something present or absent – then it’s more likely to be understood from the broader clinical audience. However, if the result brings nuances and some uncertainty, whether it has clear implications for management or not, then mainstream clinicians may not necessarily be comfortable with engaging into integrating that type of genomic healthcare into their process.

Given that I’m a genetic pathologist, how can our specialty help this process of enabling integration of genomic testing into mainstreaming?

Education, obviously, is an integral part of our job. We’re more than happy to provide advice to other health professionals, on-site or by telephone consults, regarding genomic test characteristics, the utility of a particular test, or interpreting results if there are some queries. Many of us also get involved in undergraduate or postgraduate teaching, providing the latest information on technologies and genomic testing utility.

Something very important to increase the likelihood of adopting genomic testing into mainstreaming is the accessibility of the report language. Genomics reports could be very complex, so simplifying the language is a longstanding aim; and we’re striving continuously to improve our reporting to make it easily understood.

Another important factor for non-genetic colleagues for adopting genomic testing into their daily practice is how well the follow-up is reflected in the report. What recommendations are made? Are they clear? In a busy clinic, practitioners would like to have a very clear statement about what’s required next.

Something else that would help other fellow practitioners is a test directory where everything about the genetic test, the indications, the referral pathway and the follow-up is available online – then everyone can access it and act accordingly.

The Federal Government is actively thinking about mainstreaming. There were at least two items directly related to mainstreaming in the MBS for November 2025. One of those is very close to my heart – because I was directly involved in the introduction of Rhesus D non-invasive prenatal testing into WA, and there are two MBS item numbers (73420 and 73421) for this testing that now allow midwives to request those item numbers. In other words, extending this test quite widely into mainstreaming, recognising the important involvement of midwives into management of Rhesus D-negative pregnant women.

Another recognition is that from 1 November 2025, MBS added DPYD (dihydropyrimidine dehydrogenase) genotyping to predict fluoropyrimidine-induced toxicity in specific cancers. Over the years, this test has been only available through private testing and prescribed mostly through oncologists. Now Medicare is fully funding this test.

Mainstreaming of genomic testing is clearly becoming a serious part of the healthcare landscape, and it is great to see more opportunities for access to genomic healthcare becoming available to patients and families with heritable conditions.

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